The chromatin accessibility landscape of primary human cancers

Corces MR*, Granja JM*, Shams S, Louie BH, Seoane JA, Zhou W, Silva TC, Greoneveld C, Wong CK, Cho SW, Satpathy AT, Mumbach MR, Hoadley KA, Robertson AG, Sheffield NC, Felau I, Castro MAA, Berman BP, Staudt LM, Zenklusen JC, Laird PW, Curtis C, TCGA, Greenleaf WJ*, Chang HY*.
Science, 26 October 2018

Notch2-dependent DC2s mediate splenic germinal center responses

Briseno CG, Satpathy AT, Davidson JT, Ferris ST, Dura V, Bagadia P, O’Connor KW, Theisen DJ, Murphy TL, Murphy KM.
PNAS, 16 October 2018

Enhancer connectome nominates target genes of inherited risk variants from inflammatory skin disorders

Jeng MY, Mumbach MR, Granja JM, Satpathy AT, Chang HY, Chang ALS.
Journal of Investigative Dermatology, 10 October 2018

Expression of the transcription factor ZBTB46 distinguishes human histiocytic disorders of classical dendritic cell origin

Satpathy AT*#, Brown RA*, Gomulia E, Briseno CG, Mumbach MR, Pan Z, Murphy KM, Natkunam Y, Chang HY, Kim J. *contributed equally, #corresponding author
Modern Pathology, 1 September 2018

Integrative analysis of single-cell genomics data by coupled nonnegative matrix factorizations

Duren Z*, Chen X*, Zamanighomi M*, Zeng W, Satpathy AT, Chang HY, Wang Y, Wong W.
PNAS, 24 July 2018

Transcript-indexed ATAC-seq for precision immune profiling

Satpathy AT*, Saligrama N*, Buenrostro JD*, Wei Y, Wu B, Rubin AJ, Granja JM, Li R, Mumbach MR, Lareau CA, Serratelli WS, Gennert DG, Schep AN, Corces MR, Kim YH, Khavari PA, Greenleaf WJ, Davis MM*, Chang HY*. *contributed equally
Nature Medicine, 1 May 2018