The chromatin accessibility landscape of primary human cancers
Corces MR*, Granja JM*, Shams S, Louie BH, Seoane JA, Zhou W, Silva TC, Greoneveld C, Wong CK, Cho SW, Satpathy AT, Mumbach MR, Hoadley KA, Robertson AG, Sheffield NC, Felau I, Castro MAA, Berman BP, Staudt LM, Zenklusen JC, Laird PW, Curtis C, TCGA, Greenleaf WJ*, Chang HY*.
Science, 26 October 2018
Notch2-dependent DC2s mediate splenic germinal center responses
Briseno CG, Satpathy AT, Davidson JT, Ferris ST, Dura V, Bagadia P, O’Connor KW, Theisen DJ, Murphy TL, Murphy KM.
PNAS, 16 October 2018
Enhancer connectome nominates target genes of inherited risk variants from inflammatory skin disorders
Jeng MY, Mumbach MR, Granja JM, Satpathy AT, Chang HY, Chang ALS.
Journal of Investigative Dermatology, 10 October 2018
Expression of the transcription factor ZBTB46 distinguishes human histiocytic disorders of classical dendritic cell origin
Satpathy AT*#, Brown RA*, Gomulia E, Briseno CG, Mumbach MR, Pan Z, Murphy KM, Natkunam Y, Chang HY, Kim J. *contributed equally, #corresponding author
Modern Pathology, 1 September 2018
Integrative analysis of single-cell genomics data by coupled nonnegative matrix factorizations
Duren Z*, Chen X*, Zamanighomi M*, Zeng W, Satpathy AT, Chang HY, Wang Y, Wong W.
PNAS, 24 July 2018
Transcript-indexed ATAC-seq for precision immune profiling
Satpathy AT*, Saligrama N*, Buenrostro JD*, Wei Y, Wu B, Rubin AJ, Granja JM, Li R, Mumbach MR, Lareau CA, Serratelli WS, Gennert DG, Schep AN, Corces MR, Kim YH, Khavari PA, Greenleaf WJ, Davis MM*, Chang HY*. *contributed equally
Nature Medicine, 1 May 2018